PHP Live MySQL Database Search<\/title>\r\n <link rel=\"stylesheet\" href=\"\/\/code.jquery.com\/ui\/1.13.2\/themes\/base\/jquery-ui.css\">\r\n<script src=\"https:\/\/code.jquery.com\/jquery-3.6.0.min.js\"><\/script>\r\n<script src=\"https:\/\/code.jquery.com\/jquery-migrate-1.4.1.min.js\"><\/script>\r\n <script src=\"https:\/\/code.jquery.com\/ui\/1.13.2\/jquery-ui.js\"><\/script>\r\n\r\n\r\n<link rel=\"stylesheet\" href=\"https:\/\/cdn.jsdelivr.net\/npm\/bootstrap@4.5.3\/dist\/css\/bootstrap.min.css\" integrity=\"sha384-TX8t27EcRE3e\/ihU7zmQxVncDAy5uIKz4rEkgIXeMed4M0jlfIDPvg6uqKI2xXr2\" crossorigin=\"anonymous\">\r\n<script src=\"https:\/\/cdn.jsdelivr.net\/npm\/bootstrap@4.5.3\/dist\/js\/bootstrap.bundle.min.js\" integrity=\"sha384-ho+j7jyWK8fNQe+A12Hb8AhRq26LrZ\/JpcUGGOn+Y7RsweNrtN\/tE3MoK7ZeZDyx\" crossorigin=\"anonymous\"><\/script>\r\n\r\n<link rel=\"stylesheet\" type=\"text\/css\" href=\"https:\/\/cdn.datatables.net\/v\/dt\/dt-1.13.1\/datatables.min.css\"\/>\r\n \r\n<script type=\"text\/javascript\" src=\"https:\/\/cdn.datatables.net\/v\/dt\/dt-1.13.1\/datatables.min.js\"><\/script>\r\n\r\n\r\n<style>\r\n body{\r\n font-family: Arial, sans-serif;\r\n \r\n }\r\n .site-header{\r\n}\r\n .site-content{\r\n height: auto;\r\n font-size:16px; \r\n}\r\n.img-footercontent{\r\n display:none;\r\n}\r\n.row div {\r\n text-align:center;\r\n}\r\n\r\n.btn{ \r\n text-align: center;\r\n font-style:italic;\r\n font-size: 2rem;\r\n \r\n width:10%;\r\n }\r\n.btn-secondary{\r\n width:20%;\r\n font-size:0.75rem;\r\nfloat:right;\r\n}\r\n#key1{\r\n display:inline;\r\n width:75%;\r\n margin:0;\r\n\r\n}\r\n.selectobt{\r\n background-color:#e4e4e4;\r\n}\r\n#options{\r\n display:inline;\r\n\r\n width:20%;\r\n background-color:#e4e4e4;\r\n\r\n}\r\n.search-box {\r\n position: relative;\r\n font-size: 16px;\r\n padding-bottom: 0px;\r\n }\r\n .search-box input[type=\"text\"]{\r\n height: 60px;\r\n padding: 5px 10px;\r\n border: 1px solid #CCCCCC;\r\n font-size: 16px;\r\n max-height: 100px;\r\n }\r\n .search-box input[type=\"number\"]{\r\n height: 60px;\r\n padding: 5px 10px;\r\n border: 1px solid #CCCCCC;\r\n font-size: 22px;\r\n max-height: 100px;\r\n }\r\n .search-box select{\r\n height: 60px;\r\n padding: 5px 10px;\r\n border: 1px solid #CCCCCC;\r\n font-size: 16px;\r\n max-height: 100px;\r\n }\r\n .result , .resultmeshadd , .resultMLadd{\r\n display:inline;\r\n z-index: 999;\r\n top: 100%;\r\n left: 0;\r\n overflow: auto;\r\n opacity: 1;\r\n width: 100%;\r\n box-sizing: border-box;\r\n max-height: 100px;\r\n opacity: 1;\r\n }\r\n\r\n .search-box input[type=\"text\"]{\r\n width: 75%;\r\n box-sizing: border-box;\r\n max-height: 100px;\r\n opacity: 1;\r\n }\r\n\r\n .result p , .resultmeshadd p , .resultMLadd p{\r\n width:75%;\r\n margin-inline: 2%;\r\n padding: 5px 10px;\r\n border: 1px solid #CCCCCC;\r\n border-top: none;\r\n cursor: pointer;\r\n max-height: 100px;\r\n }\r\n .result p:hover{\r\n background: #f2f2f2;\r\n max-height: 100px;\r\n }\r\n\r\n\r\n\r\n #resultadd p , #resultML p , .resultmeshadd p , .resultMLadd p{\r\n padding: 7px 5px;\r\n margin-inline: 0%;\r\n width:100%;\r\n }\r\n \r\n h1{\r\n text-align:center;\r\n font-size:5rem;\r\n }\r\n.disclaimer{\r\n display:none;\r\n}\r\nfooter h4{\r\n\r\n display:inline-block;\r\n}\r\n\r\n.imagefoo{\r\n margin-top:3%;\r\n margin-right:15%;\r\n\tclear:left;\r\n\tfloat:right;\r\n\r\n}\r\n.footerdoi{\r\n margin-top:10%;\r\n}\r\n.row{\r\n margin-top:5%;\r\n}\r\n#divport{\r\n margin-top:3%;\r\n}\r\n\r\n .helpresult{\r\n z-index: 999;\r\n top: 100%;\r\n left: 10%;\r\n overflow: auto;\r\n opacity: 1;\r\n }\r\n .helpresult p{\r\n font-size:0.9vw;\r\n margin: 0;\r\n margin-left:2%;\r\n font-style:italic;\r\n cursor: pointer;\r\n }\r\n #searchadd h2 {\r\n font-size:1.25em;\r\n display:inline;\r\n }\r\n \r\n .logo {\r\n background-image: url(\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/fenix.png\" );\r\n background-size: 75px;\r\n background-position: right;\r\n background-repeat: no-repeat;\r\n }\r\n<\/style>\r\n\r\n<\/script>\r\n<\/head>\r\n<body>\r\n <h1 id=\"titlemol\"> <img loading=\"lazy\" decoding=\"async\" class=\"imgtit\" src=\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/fenix.png\" alt=\"HTML\" width=\"75\" height=\"75\">\t\t\t\t\t\t\tMoLTRES<\/h1>\r\n <div id=\"divport\">\r\n <p>Machine Learning meTagenomic REsearch Scraper (MoLTRES) is a webtool used to find Machine learning studies applied to human microbiome data, including feature selection, biomarker identification, disease prediction and treatment.\r\n<\/p>\r\n<p>MoLTRES has a curated database of studies from the scoping review published in Front Microbiol. 2021 Feb 19;12:634511. <a href=\"https:\/\/doi.org\/10.3389\/fmicb.2021.634511\" target=\"no_blank\">doi: 10.3389\/fmicb.2021.634511<\/a> . eCollection 2021, and the updates from the COST Action CA18131 Statistical and machine learning techniques in human microbiome studies (ML4Microbiome).<\/p>\r\n<\/div>\r\n <div class=\"row\">\r\n <div class=\"col-6 search-box\" id='searchadd' >\r\n <h2>Obtain Article<\/h2> <img id=\"datahelp1\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help1\"><\/div>\r\n <input type=\"text\" class=\"form-control obtain\" id=\"key1\">\r\n \r\n <select class=\"form-control selectobt\" id=\"key1\">\r\n \r\n <option id='16S'>16S RNA<\/option>\r\n <option id='Otu'>OTU Tables<\/option>\r\n <option id='shotgun'>Shotgun Metagenomic<\/option>\r\n <option id='gene'>Gene Count<\/option>\r\n <option id='other'>Other<\/option>\r\n <\/select>\r\n \r\n \r\n\r\n\r\n \r\n <select class=\"form-control\" id=\"options\">\r\n \r\n <option id='doi'>DOI<\/option>\r\n <option id='year'>Date<\/option>\r\n <option id='method'>ML Method<\/option>\r\n <option id='inputtype'>Input Data Type<\/option>\r\n <option id='mesh'>Mesh Term<\/option>\r\n <option id='title'>Title<\/option>\r\n <\/select>\r\n \r\n <div class=\"result\" id=\"result\"><\/div>\r\n\r\n <button type=\"button\" id='goresult' class=\"btn btn-success\" >Go<\/button>\r\n \r\n\r\n\r\n <\/div>\r\n \r\n \r\n <div class=\"col-6\">\r\n <h2>Add Article<\/h2>\r\n <p>Add a new article to the database <\/p>\r\n <button type=\"button\" id='add' class=\"btn btn-success\" data-toggle=\"modal\" data-target=\"#modaldesc\">Go<\/button>\r\n \r\n \r\n \r\n \r\n <div class=\"modal fade\" id=\"modaldesc\" role=\"dialog\">\r\n <div class=\"modal-dialog\">\r\n <div class=\"modal-content\">\r\n <div class=\"modal-header\">\r\n <button type=\"button\" class=\"close\" data-dismiss=\"modal\" aria-label=\"Close\">\r\n <span aria-hidden=\"true\">×<\/span>\r\n <\/button>\r\n <\/div>\r\n <div class=\"modal-body\">\r\n <form id='formadd'>\r\n \r\n <label for=\"doiadd\">DOI:<\/label> \r\n <img id=\"datahelp2\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help2\"><\/div>\r\n\r\n<input type=\"text\" id=\"doiadd\" name=\"doiadd\" autocomplete=\"off\"><br><br>\r\n <div id='containermesh'>\r\n <label for=\"meshadd\">MESH:<\/label>\r\n <img id=\"datahelp3\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help3\"><\/div>\r\n\r\n\r\n <input type=\"text\" class=\"meshaddcl\" id=\"meshadd\" name=\"meshadd\">\r\n <div class=\"result\" id=\"resultadd\"><\/div>\r\n <\/div>\r\n <button type=\"button\" id='advancedmesh' class=\"btn btn-secondary btn-sm\">Add another mesh<\/button>\r\n \r\n\r\n \r\n \r\n <br><br>\r\n <div id='containerinput'>\r\n <label for=\"inputadd\">Input Data Type:<\/label>\r\n <img id=\"datahelp4\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help4\"><\/div>\r\n <select class=\"form-control inputadd\" id=\"inputadd\">\r\n \r\n <option id='16S'>16S RNA<\/option>\r\n <option id='Otu'>OTU Tables<\/option>\r\n <option id='shotgun'>Shotgun Metagenomic<\/option>x\r\n <option id='gene'>Gene Count<\/option>\r\n <option id='other'>Other<\/option>\r\n <\/select> \r\n <\/div>\r\n <button type=\"button\" id='advancedinput' class=\"btn btn-secondary btn-sm\">Add another Input Data Type<\/button>\r\n <br><br>\r\n \r\n <div id='containerML'>\r\n <label for=\"mladd\">ML Method:<\/label>\r\n <img id=\"datahelp5\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help5\"><\/div>\r\n <input type=\"text\" id=\"mladd\" name=\"mladd\" >\r\n <span id=\"resultado\"><\/span>\r\n <div class=\"result\" id=\"resultML\"><\/div>\r\n <\/div>\r\n \r\n <button type=\"button\" id='advancedml' class=\"btn btn-secondary btn-sm\">Add another ML Method<\/button>\r\n <br><br>\r\n <input type=\"submit\" value=\"Submit\">\r\n <br><br>\r\n <\/form>\r\n <\/div>\r\n <\/div>\r\n <\/div>\r\n<\/div>\r\n\r\n \r\n <\/div>\r\n<\/div>\r\n<footer class=\"footerdoi\">\r\n \t\t\t\t\t\t<div>\r\n\r\n\r\n <h4>This webtool is based upon work from COST Action COST CA18131\/ML4Microbiome supported by COST (European Cooperation in Science and Technology).\r\n<\/h4>\r\n <h4>Funded by the Horizon 2020 Framework Programme of the European Union.\r\n<\/h4>\r\n\r\n<img loading=\"lazy\" decoding=\"async\" class=\"imagefoo\" src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/03\/EU.png\" alt=\"HTML\" width=\"150\" height=\"150\">\t\t\t\t\t\t\t\r\n<img loading=\"lazy\" decoding=\"async\" class=\"imagefoo\" src=\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/lacost.jpeg\" alt=\"HTML\" width=\"150\" height=\"150\">\t\t\t\t\t\t\t\r\n<img loading=\"lazy\" decoding=\"async\" class=\"imagefoo\" src=\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/micro.png\" alt=\"HTML\" width=\"150\" height=\"150\">\t\t\t\t\t\t\t\r\n\r\n<\/div>\r\n\r\n\r\n\r\n<h4>\u00a9 Computacional Biology Group Imdea Food Institute 2023<\/h4>\r\n<br>\r\n<h4>Icon made by Darius Dan from www.flaticon.com<\/h4>\r\n<\/footer>\r\n<script>\r\njQuery(document).ready(function($) {\r\n \r\n $('.logo').on('click', function(event) {\r\n if (!$(event.target).closest('a').length) {\r\n \r\n window.open('http:\/\/imdeafoodcompubio.com\/index.php\/moltres\/', '_blank');\r\n }\r\n });\r\n var input=['16S RNA','OTU tables','Shotgun metagenomic','Gene Count','Other'];\r\n \/\/Keyup event to fill the div which will show the autocomplete suggestions\r\n $('.selectobt').hide();\r\n $('.selectml').hide();\r\n\r\n var contmesh=0;\r\n var continput=0;\r\n var contml=0;\r\n var cite ;\r\n var year;\r\n var doiPattern = \/^10\\.\\d{4,9}\\\/[-._;()\\\/:A-Z0-9]+$\/i;\r\n \r\n $(\"#options\").change(function() {\r\n $('#result').empty();\r\n $('.obtain').val('');\r\n var idoption = $(\"#options option:selected\").attr(\"id\");\r\n if(idoption=='inputtype'){\r\n $('.selectobt').show();\r\n $('.obtain').hide();\r\n $('.selectml').hide();\r\n }else {\r\n $('.selectml').hide();\r\n $('.selectobt').hide();\r\n $('.obtain').show();\r\n }\r\n});\r\n \r\n \r\n $('.obtain').on('keyup', function() { \r\n var idoption = $(\"#options option:selected\").attr(\"id\");\r\n var key = $(this).val();\r\n if (key!=\"\"){\r\n if (idoption!='mesh' && idoption!='method'){\r\n jQuery.ajax({\r\n url:'https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/obtdoi.php',\r\n type: 'post',\r\n data: {search:key,type:idoption},\r\n dataType: 'json',\r\n success:function(response){\r\n $('#result').empty(); \r\n var len = response.length;\r\n for( var i = 0; i<len; i++){\r\n var name = response[i]['name'];\r\n $(\"#result\").append(\"<p>\"+name+\"<\/p>\");\r\n }\r\n }\r\n });\r\n}else {\r\n jQuery.ajax({\r\n url:'https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/obtth.php',\r\n type: 'post',\r\n data: {search:key,type:idoption},\r\n dataType: 'json',\r\n success:function(response){\r\n console.log(response);\r\n $('#result').empty(); \r\n var len = response.length;\r\n if(idoption=='mesh'){\r\n for( var i = 0; i<len; i++){\r\n var name = response[i]['label'];\r\n $(\"#result\").append(\"<p>\"+name+\"<\/p>\");\r\n }\r\n }else {\r\n for( var i = 0; i<len; i++){\r\n var name = response[i];\r\n $(\"#result\").append(\"<p>\"+name+\"<\/p>\");\r\n } \r\n \r\n }\r\n }\r\n });\r\n}\r\n}else {\r\n $('#result').empty(); \r\n}\r\n\r\n\r\n})\r\n\r\n\r\n$(document).on(\"click\", \"#result p\", function(){\r\n $('#result').empty(); \r\n 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url:'https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/ajaxsql.php',\r\n type: 'post',\r\n data: {search:key,type:idoption,num:1},\r\n dataType: 'json',\r\n success:function(response){\r\n datares=[];\r\n copy=\"\";\r\n \r\n for (let i = 0; i < response.length ; i++) {\r\n datares[i]={};\r\n copy=copy+'\/ox';\r\n \r\n for (var dato in response[i]){\r\n copy=copy+response[i][dato]+'\/tx';\r\n copy = copy.replace(\/\"\/g, \"\");\r\n\r\n}\r\n}\r\n var url = 'http:\/\/imdeafoodcompubio.com\/index.php\/moltresresults\/' ;\r\n var form = $('<form action=\"' + url + '\" method=\"post\" target=\"_blank\">' +\r\n '<input type=\"text\" name=\"titles\" id=\"titles\" value=\"'+copy+'\"\/>' +\r\n '<\/form>');\r\n form.hide();\r\n $('body').append(form);\r\n form.submit(); \r\n }\r\n });\r\n });\r\n \r\n\r\n $('#mladd').on('keyup', function() { \r\n var key = $(this).val();\r\n jQuery.ajax({\r\n url:'https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/obtth.php',\r\n type: 'post',\r\n data: {search:key,type:'method'},\r\n dataType: 'json',\r\n success:function(response){\r\n $('#resultML').empty(); \r\n var len = response.length;\r\n for( var i = 0; i<len; i++){\r\n var name = response[i];\r\n $(\"#resultML\").append(\"<p>\"+name+\"<\/p>\");\r\n } \r\n }\r\n });\r\n\r\n\r\n})\r\n \r\n\r\n $('#containerML').on('keyup', 'input', function() {\r\n var key = $(this).val();\r\n var id = $(this).attr(\"id\");\r\n jQuery.ajax({\r\n url:'https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/obtth.php',\r\n type: 'post',\r\n data: {search:key,type:'method'},\r\n dataType: 'json',\r\n success:function(response){\r\n if(id=='mladd'){\r\n $('#resultML').empty(); \r\n var len = response.length;\r\n for( var i = 0; i<len; i++){\r\n var name = response[i];\r\n $(\"#resultML\").append(\"<p>\"+name+\"<\/p>\");\r\n }\r\n }\r\n else {\r\n $('#t'+id).empty(); 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$('#formadd').submit(function(event) {\r\n \/\/ Prevent the default form submission\r\n event.preventDefault();\r\n var mesharray=[];\r\n var datatypearray=[];\r\n var mlarray=[];\r\n\r\n \/\/ Get the values of the form inputs\r\n var doi = $('#doiadd').val();\r\n var mesh = $('#meshadd').val();\r\n var datatype = $(\"#inputadd option:selected\").val();\r\n var ml = $('#mladd').val();\r\n \/\/ Validate the form inputs\r\n if (doi === '') {\r\n alert('error DOI cant be null');\r\n return;\r\n }\r\n if (mesh === '') {\r\n alert('error in the Mesh cant be null if you dont have one type - ');\r\n\r\n return;\r\n }\r\n if (ml === '') {\r\n alert('error in the ML Method cant be null if you dont have one type - ');\r\n\r\n return;\r\n }\r\n if(continput>0){\r\n for (let i = 1; i <= continput; i++) {\r\n prov = $(\"#inputtype\"+i+\" option:selected\").val();\r\n if(datatype.indexOf(prov)==-1){\r\n datatype=datatype+','+prov;\r\n }\r\n }\r\n }\r\n if(contmesh>0){\r\n for (let i = 1; i <= contmesh; i++) {\r\nprov = $(\"#inputmesh\"+i).val(); \r\n if(mesh.indexOf(prov)==-1){\r\nmesh=mesh+';'+prov;\r\n }\r\n }\r\n }\r\n if(contml>0){\r\n for (let i = 1; i <= contml; i++) {\r\n prov = $(\"#inputml\"+i).val();\r\n if(ml.indexOf(prov)==-1){\r\n ml=ml+','+prov;\r\n }\r\n }\r\n }\r\n\r\n $.post('https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/cite.php', {data:doi}).done(function(data){\r\n let ind = data.indexOf(\"tit%\")\r\n title = data.substring(0, ind);\r\n dtx = data.substring(ind+6)\r\n \r\n let indice = dtx.indexOf(\"{\");\r\n cite = dtx.substring(0, indice);\r\n year = (dtx.substring(indice).replace(\/[{}]\/g, \"\"));\r\n year = year.replace(\/'\/g, \"\");\r\n year=parseInt(year.trim(), 10);\r\n $.post('https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/adddoi.php', {doi:doi,cite:cite,title:title,year:year,method:ml,mesh:mesh,type:datatype}).done(function(data){\r\n if(data==0){\r\n alert('error in the DOI this doi is already in the database');\r\n }else {\r\n console.log(data)\r\n if(data==\"doi invalid\"){\r\n alert('error in the DOI this doi is invalid ');\r\n\r\n }else {\r\n $('#formadd')[0].submit();\r\n}\r\n }\r\n });\r\n });\r\n \r\n });\r\n\r\n\r\n$(document).on(\"mouseenter\", \".help\", function(){\r\n$(\".helpresult\").empty();\r\nvar idhelp = $(this).attr(\"id\");\r\nif (idhelp==\"datahelp1\") {\r\n $(\"#help1\").append(\"<p>Click on DOI to show more search options.<\/p>\");\r\n \r\n} else if(idhelp==\"datahelp2\"){\r\n $(\"#help2\").append(\"<p>Doi format : 10.3389\/fmicb.2021.634511<\/p>\");\r\n\r\n} \r\nelse if(idhelp==\"datahelp3\"){\r\n $(\"#help3\").append(\"<p>Type the Mesh to autocomplete it<\/p>\");\r\n\r\n} \r\nelse if(idhelp==\"datahelp4\"){\r\n $(\"#help4\").append(\"<p>Click to show more options.<\/p>\");\r\n\r\n} \r\nelse if(idhelp==\"datahelp5\"){\r\n $(\"#help5\").append(\"<p>Select one ML Method of catalog.<\/p>\");\r\n\r\n} \r\n});\r\n\r\n$(document).on(\"mouseleave\", 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{"id":913,"date":"2023-02-15T12:04:10","date_gmt":"2023-02-15T12:04:10","guid":{"rendered":"http:\/\/imdeafoodcompubio.com\/?page_id=913"},"modified":"2023-06-08T11:14:23","modified_gmt":"2023-06-08T11:14:23","slug":"moltres","status":"publish","type":"page","link":"https:\/\/imdeafoodcompubio.com\/index.php\/moltres\/","title":{"rendered":"Moltres"},"content":{"rendered":"\r\n\r\n\r\n\r\n\r\nPHP Live MySQL Database Search<\/title>\r\n <link rel=\"stylesheet\" href=\"\/\/code.jquery.com\/ui\/1.13.2\/themes\/base\/jquery-ui.css\">\r\n<script src=\"https:\/\/code.jquery.com\/jquery-3.6.0.min.js\"><\/script>\r\n<script src=\"https:\/\/code.jquery.com\/jquery-migrate-1.4.1.min.js\"><\/script>\r\n <script src=\"https:\/\/code.jquery.com\/ui\/1.13.2\/jquery-ui.js\"><\/script>\r\n\r\n\r\n<link rel=\"stylesheet\" href=\"https:\/\/cdn.jsdelivr.net\/npm\/bootstrap@4.5.3\/dist\/css\/bootstrap.min.css\" integrity=\"sha384-TX8t27EcRE3e\/ihU7zmQxVncDAy5uIKz4rEkgIXeMed4M0jlfIDPvg6uqKI2xXr2\" crossorigin=\"anonymous\">\r\n<script src=\"https:\/\/cdn.jsdelivr.net\/npm\/bootstrap@4.5.3\/dist\/js\/bootstrap.bundle.min.js\" integrity=\"sha384-ho+j7jyWK8fNQe+A12Hb8AhRq26LrZ\/JpcUGGOn+Y7RsweNrtN\/tE3MoK7ZeZDyx\" crossorigin=\"anonymous\"><\/script>\r\n\r\n<link rel=\"stylesheet\" type=\"text\/css\" href=\"https:\/\/cdn.datatables.net\/v\/dt\/dt-1.13.1\/datatables.min.css\"\/>\r\n \r\n<script type=\"text\/javascript\" src=\"https:\/\/cdn.datatables.net\/v\/dt\/dt-1.13.1\/datatables.min.js\"><\/script>\r\n\r\n\r\n<style>\r\n body{\r\n font-family: Arial, sans-serif;\r\n \r\n }\r\n .site-header{\r\n}\r\n .site-content{\r\n height: auto;\r\n font-size:16px; \r\n}\r\n.img-footercontent{\r\n display:none;\r\n}\r\n.row div {\r\n text-align:center;\r\n}\r\n\r\n.btn{ \r\n text-align: center;\r\n font-style:italic;\r\n font-size: 2rem;\r\n \r\n width:10%;\r\n }\r\n.btn-secondary{\r\n width:20%;\r\n font-size:0.75rem;\r\nfloat:right;\r\n}\r\n#key1{\r\n display:inline;\r\n width:75%;\r\n 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input[type=\"text\"]{\r\n width: 75%;\r\n box-sizing: border-box;\r\n max-height: 100px;\r\n opacity: 1;\r\n }\r\n\r\n .result p , .resultmeshadd p , .resultMLadd p{\r\n width:75%;\r\n margin-inline: 2%;\r\n padding: 5px 10px;\r\n border: 1px solid #CCCCCC;\r\n border-top: none;\r\n cursor: pointer;\r\n max-height: 100px;\r\n }\r\n .result p:hover{\r\n background: #f2f2f2;\r\n max-height: 100px;\r\n }\r\n\r\n\r\n\r\n #resultadd p , #resultML p , .resultmeshadd p , .resultMLadd p{\r\n padding: 7px 5px;\r\n margin-inline: 0%;\r\n width:100%;\r\n }\r\n \r\n h1{\r\n text-align:center;\r\n font-size:5rem;\r\n }\r\n.disclaimer{\r\n display:none;\r\n}\r\nfooter h4{\r\n\r\n display:inline-block;\r\n}\r\n\r\n.imagefoo{\r\n margin-top:3%;\r\n margin-right:15%;\r\n\tclear:left;\r\n\tfloat:right;\r\n\r\n}\r\n.footerdoi{\r\n margin-top:10%;\r\n}\r\n.row{\r\n margin-top:5%;\r\n}\r\n#divport{\r\n margin-top:3%;\r\n}\r\n\r\n .helpresult{\r\n z-index: 999;\r\n top: 100%;\r\n left: 10%;\r\n overflow: auto;\r\n opacity: 1;\r\n }\r\n .helpresult p{\r\n font-size:0.9vw;\r\n margin: 0;\r\n margin-left:2%;\r\n font-style:italic;\r\n cursor: pointer;\r\n }\r\n #searchadd h2 {\r\n font-size:1.25em;\r\n display:inline;\r\n }\r\n \r\n .logo {\r\n background-image: url(\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/fenix.png\" );\r\n background-size: 75px;\r\n background-position: right;\r\n background-repeat: no-repeat;\r\n }\r\n<\/style>\r\n\r\n<\/script>\r\n<\/head>\r\n<body>\r\n <h1 id=\"titlemol\"> <img loading=\"lazy\" decoding=\"async\" class=\"imgtit\" src=\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/fenix.png\" alt=\"HTML\" width=\"75\" height=\"75\">\t\t\t\t\t\t\tMoLTRES<\/h1>\r\n <div id=\"divport\">\r\n <p>Machine Learning meTagenomic REsearch Scraper (MoLTRES) is a webtool used to find Machine learning studies applied to human microbiome data, including feature selection, biomarker identification, disease prediction and treatment.\r\n<\/p>\r\n<p>MoLTRES has a curated database of studies from the scoping review published in Front Microbiol. 2021 Feb 19;12:634511. <a href=\"https:\/\/doi.org\/10.3389\/fmicb.2021.634511\" target=\"no_blank\">doi: 10.3389\/fmicb.2021.634511<\/a> . eCollection 2021, and the updates from the COST Action CA18131 Statistical and machine learning techniques in human microbiome studies (ML4Microbiome).<\/p>\r\n<\/div>\r\n <div class=\"row\">\r\n <div class=\"col-6 search-box\" id='searchadd' >\r\n <h2>Obtain Article<\/h2> <img id=\"datahelp1\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help1\"><\/div>\r\n <input type=\"text\" class=\"form-control obtain\" id=\"key1\">\r\n \r\n <select class=\"form-control selectobt\" id=\"key1\">\r\n \r\n <option id='16S'>16S RNA<\/option>\r\n <option id='Otu'>OTU Tables<\/option>\r\n <option id='shotgun'>Shotgun Metagenomic<\/option>\r\n <option id='gene'>Gene Count<\/option>\r\n <option id='other'>Other<\/option>\r\n <\/select>\r\n \r\n \r\n\r\n\r\n \r\n <select class=\"form-control\" id=\"options\">\r\n \r\n <option id='doi'>DOI<\/option>\r\n <option id='year'>Date<\/option>\r\n <option id='method'>ML Method<\/option>\r\n <option id='inputtype'>Input Data Type<\/option>\r\n <option id='mesh'>Mesh Term<\/option>\r\n <option id='title'>Title<\/option>\r\n <\/select>\r\n \r\n <div class=\"result\" id=\"result\"><\/div>\r\n\r\n <button type=\"button\" id='goresult' class=\"btn btn-success\" >Go<\/button>\r\n \r\n\r\n\r\n <\/div>\r\n \r\n \r\n <div class=\"col-6\">\r\n <h2>Add Article<\/h2>\r\n <p>Add a new article to the database <\/p>\r\n <button type=\"button\" id='add' class=\"btn btn-success\" data-toggle=\"modal\" data-target=\"#modaldesc\">Go<\/button>\r\n \r\n \r\n \r\n \r\n <div class=\"modal fade\" id=\"modaldesc\" role=\"dialog\">\r\n <div class=\"modal-dialog\">\r\n <div class=\"modal-content\">\r\n <div class=\"modal-header\">\r\n <button type=\"button\" class=\"close\" data-dismiss=\"modal\" aria-label=\"Close\">\r\n <span aria-hidden=\"true\">×<\/span>\r\n <\/button>\r\n <\/div>\r\n <div class=\"modal-body\">\r\n <form id='formadd'>\r\n \r\n <label for=\"doiadd\">DOI:<\/label> \r\n <img id=\"datahelp2\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help2\"><\/div>\r\n\r\n<input type=\"text\" id=\"doiadd\" name=\"doiadd\" autocomplete=\"off\"><br><br>\r\n <div id='containermesh'>\r\n <label for=\"meshadd\">MESH:<\/label>\r\n <img id=\"datahelp3\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help3\"><\/div>\r\n\r\n\r\n <input type=\"text\" class=\"meshaddcl\" id=\"meshadd\" name=\"meshadd\">\r\n <div class=\"result\" id=\"resultadd\"><\/div>\r\n <\/div>\r\n <button type=\"button\" id='advancedmesh' class=\"btn btn-secondary btn-sm\">Add another mesh<\/button>\r\n \r\n\r\n \r\n \r\n <br><br>\r\n <div id='containerinput'>\r\n <label for=\"inputadd\">Input Data Type:<\/label>\r\n <img id=\"datahelp4\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help4\"><\/div>\r\n <select class=\"form-control inputadd\" id=\"inputadd\">\r\n \r\n <option id='16S'>16S RNA<\/option>\r\n <option id='Otu'>OTU Tables<\/option>\r\n <option id='shotgun'>Shotgun Metagenomic<\/option>x\r\n <option id='gene'>Gene Count<\/option>\r\n <option id='other'>Other<\/option>\r\n <\/select> \r\n <\/div>\r\n <button type=\"button\" id='advancedinput' class=\"btn btn-secondary btn-sm\">Add another Input Data Type<\/button>\r\n <br><br>\r\n \r\n <div id='containerML'>\r\n <label for=\"mladd\">ML Method:<\/label>\r\n <img id=\"datahelp5\" class=\"help \"src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/06\/icon1.png\" width=\"15px\" heigth=\"15px\" \/>\r\n <div class=\"helpresult\" id=\"help5\"><\/div>\r\n <input type=\"text\" id=\"mladd\" name=\"mladd\" >\r\n <span id=\"resultado\"><\/span>\r\n <div class=\"result\" id=\"resultML\"><\/div>\r\n <\/div>\r\n \r\n <button type=\"button\" id='advancedml' class=\"btn btn-secondary btn-sm\">Add another ML Method<\/button>\r\n <br><br>\r\n <input type=\"submit\" value=\"Submit\">\r\n <br><br>\r\n <\/form>\r\n <\/div>\r\n <\/div>\r\n <\/div>\r\n<\/div>\r\n\r\n \r\n <\/div>\r\n<\/div>\r\n<footer class=\"footerdoi\">\r\n \t\t\t\t\t\t<div>\r\n\r\n\r\n <h4>This webtool is based upon work from COST Action COST CA18131\/ML4Microbiome supported by COST (European Cooperation in Science and Technology).\r\n<\/h4>\r\n <h4>Funded by the Horizon 2020 Framework Programme of the European Union.\r\n<\/h4>\r\n\r\n<img loading=\"lazy\" decoding=\"async\" class=\"imagefoo\" src=\"http:\/\/imdeafoodcompubio.com\/wp-content\/uploads\/2022\/03\/EU.png\" alt=\"HTML\" width=\"150\" height=\"150\">\t\t\t\t\t\t\t\r\n<img loading=\"lazy\" decoding=\"async\" class=\"imagefoo\" src=\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/lacost.jpeg\" alt=\"HTML\" width=\"150\" height=\"150\">\t\t\t\t\t\t\t\r\n<img loading=\"lazy\" decoding=\"async\" class=\"imagefoo\" src=\"https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/img\/micro.png\" alt=\"HTML\" width=\"150\" height=\"150\">\t\t\t\t\t\t\t\r\n\r\n<\/div>\r\n\r\n\r\n\r\n<h4>\u00a9 Computacional Biology Group Imdea Food Institute 2023<\/h4>\r\n<br>\r\n<h4>Icon made by Darius Dan from www.flaticon.com<\/h4>\r\n<\/footer>\r\n<script>\r\njQuery(document).ready(function($) {\r\n \r\n $('.logo').on('click', function(event) {\r\n if (!$(event.target).closest('a').length) {\r\n \r\n window.open('http:\/\/imdeafoodcompubio.com\/index.php\/moltres\/', '_blank');\r\n }\r\n });\r\n var input=['16S RNA','OTU tables','Shotgun metagenomic','Gene Count','Other'];\r\n \/\/Keyup event to fill the div which will show the autocomplete suggestions\r\n $('.selectobt').hide();\r\n $('.selectml').hide();\r\n\r\n var contmesh=0;\r\n var continput=0;\r\n var contml=0;\r\n var cite ;\r\n var year;\r\n var doiPattern = \/^10\\.\\d{4,9}\\\/[-._;()\\\/:A-Z0-9]+$\/i;\r\n \r\n $(\"#options\").change(function() {\r\n $('#result').empty();\r\n $('.obtain').val('');\r\n var idoption = $(\"#options option:selected\").attr(\"id\");\r\n if(idoption=='inputtype'){\r\n $('.selectobt').show();\r\n $('.obtain').hide();\r\n $('.selectml').hide();\r\n }else {\r\n $('.selectml').hide();\r\n $('.selectobt').hide();\r\n $('.obtain').show();\r\n }\r\n});\r\n \r\n \r\n $('.obtain').on('keyup', function() { \r\n var idoption = $(\"#options option:selected\").attr(\"id\");\r\n var key = $(this).val();\r\n 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for( var i = 0; i<len; i++){\r\n var name = response[i]['label'];\r\n $('#t'+id).append(\"<p>\"+name+\"<\/p>\");\r\n }\r\n }\r\n }\r\n });\r\n\r\n\r\n})\r\n\r\n\r\n\r\n $('#formadd').submit(function(event) {\r\n \/\/ Prevent the default form submission\r\n event.preventDefault();\r\n var mesharray=[];\r\n var datatypearray=[];\r\n var mlarray=[];\r\n\r\n \/\/ Get the values of the form inputs\r\n var doi = $('#doiadd').val();\r\n var mesh = $('#meshadd').val();\r\n var datatype = $(\"#inputadd option:selected\").val();\r\n var ml = $('#mladd').val();\r\n \/\/ Validate the form inputs\r\n if (doi === '') {\r\n alert('error DOI cant be null');\r\n return;\r\n }\r\n if (mesh === '') {\r\n alert('error in the Mesh cant be null if you dont have one type - ');\r\n\r\n return;\r\n }\r\n if (ml === '') {\r\n alert('error in the ML Method cant be null if you dont have one type - ');\r\n\r\n return;\r\n }\r\n if(continput>0){\r\n for (let i = 1; i <= continput; i++) {\r\n prov = 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$.post('https:\/\/imdeafoodcompubio.com\/wp-content\/themes\/bento-child\/doi\/adddoi.php', {doi:doi,cite:cite,title:title,year:year,method:ml,mesh:mesh,type:datatype}).done(function(data){\r\n if(data==0){\r\n alert('error in the DOI this doi is already in the database');\r\n }else {\r\n console.log(data)\r\n if(data==\"doi invalid\"){\r\n alert('error in the DOI this doi is invalid ');\r\n\r\n }else {\r\n $('#formadd')[0].submit();\r\n}\r\n }\r\n });\r\n });\r\n \r\n });\r\n\r\n\r\n$(document).on(\"mouseenter\", \".help\", function(){\r\n$(\".helpresult\").empty();\r\nvar idhelp = $(this).attr(\"id\");\r\nif (idhelp==\"datahelp1\") {\r\n $(\"#help1\").append(\"<p>Click on DOI to show more search options.<\/p>\");\r\n \r\n} else if(idhelp==\"datahelp2\"){\r\n $(\"#help2\").append(\"<p>Doi format : 10.3389\/fmicb.2021.634511<\/p>\");\r\n\r\n} \r\nelse if(idhelp==\"datahelp3\"){\r\n $(\"#help3\").append(\"<p>Type the Mesh to autocomplete it<\/p>\");\r\n\r\n} \r\nelse 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doiPattern.test(doi);\r\n}\r\n\r\n\r\n})\r\n<\/script>\r\n\r\n\r\n<\/body>\r\n\r\n<\/html>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-913","page","type-page","status-publish","hentry","no-thumb"],"_links":{"self":[{"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/pages\/913","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/comments?post=913"}],"version-history":[{"count":3,"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/pages\/913\/revisions"}],"predecessor-version":[{"id":939,"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/pages\/913\/revisions\/939"}],"wp:attachment":[{"href":"https:\/\/imdeafoodcompubio.com\/index.php\/wp-json\/wp\/v2\/media?parent=913"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}